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Advanced Search Abstract Canola is an important vegetable oil crop globally, and the understanding of the molecular mechanism underlying fatty acids biosynthesis during seed embryo development is an important research goal.
RNA-Seq analysis generated 58, sequence reads aligned with 32, genes. It was found that a total of 55 differential expression genes DEGs encoding 28 enzymes function in carbon flow to fatty acids of storage TAG.
Most of the DEGs encoding above enzymes showed similar expression pattern, indicating the DEGs are cooperatively involved in carbon flow into fatty acids. In addition, 41 DEGs associated with signal transductions, transport and metabolic processing 231975 essay auxin, gibberellin, abscisic acid, cytokinin and salicylic acids were found in the RNA-Seq database, which indicates the important roles of the phytohormones in controlling embryo development and fatty acids synthesis.
The transgenic plants displayed reduced embryo sizes, decreased fatty acids contents and altered seed fatty acids composition in canola. Our results indicate that BnDof5. Overall this study presents new information on the global expression patterns of genes during embryo development and will expand our understanding of the complex molecular mechanism of carbon flow into fatty acids and embryo development in canola.
Introduction Canola Brassica napus is a major oil producing crop and is the third largest source of the vegetable oil in the world. Canola oil has high nutritional value with a high content of unsaturated C18 fatty acids and a low content of erucic acid Dupont et al.
Also, vegetable oil has great potential as a new renewable source for biodiesel fuels and chemical sectors Thelen et al.
Recently, the demand for vegetable oil has rapidly increased, thus the understanding of oil biosynthesis and regulation is a major challenge for the purpose of enriching canola oil content.
The vegetable storage oil in seeds is composed mainly of triacylglycerol TAG synthesized from glycerolphosphate and fatty acids FAs Voelker and Kinney Finally, TAG formation begins with the formation of lysophosphatidic acid in the endoplasmic reticulum ER by glycerolphosphate acyltransferase, and the synthesis is completed by lysophosphatidic acid acyltransferase and diacylglycerol acyltransferase Voelker and Kinney During TAG accumulation, canola embryos use sucrose, as well as glucose and fructose, as carbon sources for fatty acid synthesis.
Sucrose is mostly cleaved by sucrose synthase and the cleavage products are metabolized through glycolysis, which occurs in both cytosol and plastid Hills Exchange of the metabolites between plastids and cytosol occur by the transport of glcosephophate, triose phosphate, phosphoenolpyruvic acid, pentose phosphate and pyruvate Hills Before the TAG accumulation, canola embryos have an initial phase of starch accumulation Hills Starch levels decrease during embryo development, and in the meantime accumulation of TAG and protein increase.
Starch is almost not detected at maturity, whereas storage oil and protein can account for major components of the dry weight O'Neill et al. Starch synthesis in plastids of embryos begins from glucose 6-phosphate, which is transported from the cytosol to the plastid and catalyzed into glucosephosphate by phosphoglucomutase.
ADP-glucose pyrophosphorylase then catalyzes the synthesis of ADP glucose, which constitutes both amylose and amylopectin Zeeman et al. In developing canola siliques, transcription factors not only regulate seed and embryo development, but also storage reserve metabolism, such as TAG synthesis and glycolytic pathway.
WRI1 is known to regulate the genes encoding enzymes for fatty acid biosynthesis and plastidial glycolysis Cernac and Benning Darwin Initiative Annual Report 1.
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The identification of melanoma-specific dysregulated genes could identify new molecular markers. By applying bioinformatic tools for screening of biomedical databases, a melanoma-specific gene expression profile “data warehouse” was constructed.
Utilizable data sets of global gene expression analyses were available from nine studies that applied different technology platforms.